PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG046580.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 215aa MW: 22846.7 Da PI: 10.0533

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG046580.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79	4.4e-25	137	180	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 ++epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr rsrk++e TRIDC6BG046580.2 137 EPEPGRCRRTDGKKWRCSRDVVQGHKYCERHVHRGRGRSRKPVE 180 69***************************************998 PP
2	QLQ	53.4	7.8e-19	71	107	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 sa+T +Q q+L++Q+l+y+y+aa++PvP +L+++i+k TRIDC6BG046580.2 71 SALTFMQQQELEHQVLIYRYFAAGAPVPVHLVLPIWK 107 799*********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
DEKEADSLQP PSKQPRLSSA DSNAGTCSHT RAVTTAVSSP LGLGLGLGLG GDSRGEQQAF 60 EARAAAAAAK SALTFMQQQE LEHQVLIYRY FAAGAPVPVH LVLPIWKSVS ASSFGPHRFP 120 SLIGLGSLCF DYRSSMEPEP GRCRRTDGKK WRCSRDVVQG HKYCERHVHR GRGRSRKPVE 180 GASAAPAHSG SPTTAPPRAI GFSPAGILHA THSAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	3e-38	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG046580.2