PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG046710.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 142aa    MW: 16237.8 Da    PI: 10.7757
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG046710.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.43.8e-141559147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6BG046710.6 15 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 59
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
ASKKVRKPYT ITKSRESWTE QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF  60
LKVQKNGTSE HVPPPRPKRK AAHPYPQKAS KNEPGYALKT DPSAMLRNSG MNVAVSPWTH  120
NSIPPVVASS FMKGLYFKVP FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.23e-49MYB_related family protein