PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG048850.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 281aa    MW: 30250.2 Da    PI: 8.8032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG048850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.3e-0983130455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  TRIDC6BG048850.1  83 SHSLAERVRRERISERMRYLQELVPGC----DKVTGKAGMLDEIINYVQSLQ 130
                       8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
SGSASSGDGS TKRKPDAYVD AKDDCKRPRG KQQLCDPGEA EGAAKGRPEK PKACARKKPE  60
AAATGQKTDY IHVRARRGQA TDSHSLAERV RRERISERMR YLQELVPGCD KVTGKAGMLD  120
EIINYVQSLQ KQVEFLSMKI AASNPVVNFN IVDDLFGGRR MNQACGPAAA LPAMTLPMHH  180
AQLDPSCLQM SSTTMQQMQQ PAAGFGLDML LNNPYPAAQS ASRSAAATPV SVSAAASVES  240
SLDVNGAAAW DIASQHLFSG FDAQFQSVQT DRRLKNLITE L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.12e-37bHLH family protein