PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG050790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 269aa    MW: 30928 Da    PI: 8.9768
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG050790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.18.7e-111795291
              FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
                      fYn Y+ e GF +r  ks+ + + +   +++ vC +               +++ + r++C a +++   kd+ w++++ +++HnH+l+p
  TRIDC6BG050790.1 17 FYNLYSWEKGFGIRYGKSRLNVERT-KCMQEIVCGCGKAG----------VENTRSCRCECPALIRLLYLKDNGWYISEHREQHNHSLSP 95
                      9****************99994444.45556666543322..........23345689*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MPAPGTSFDT LGETYAFYNL YSWEKGFGIR YGKSRLNVER TKCMQEIVCG CGKAGVENTR  60
SCRCECPALI RLLYLKDNGW YISEHREQHN HSLSPTYGHT IHWPSHNHID AYSRDLVEQL  120
RQNNVNLAKV HSIIGSFFGS MEKLPFTKRA LKNLCGKISR ERVEDDVRKT MEVFADLGSR  180
DPHFTYRVQA DQDGRITTRM WANGSSRLQY TFFEDVVTFD TTYRTNLYNM PFGLFVGVII  240
ISSASSYLGF WSVVRRSRHL SGFSQNLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-17FAR1 family protein