PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG051520.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 90aa    MW: 10170.4 Da    PI: 5.0945
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG051520.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB45.42e-142425595
             NF-YB 55 qrekrktingddllwalatlGfedyveplkvylkkyreleg 95
                      + e+r+t++++d+ w+  +lGf+ yv+p+++yl+ yre + 
  TRIDC6BG051520.1  2 RSEHRRTVAPEDFTWSCQNLGFDSYVQPMETYLRGYREYDI 42
                      68***********************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
ARSEHRRTVA PEDFTWSCQN LGFDSYVQPM ETYLRGYREY DIARGRSSRG ARPPAPPAMA  60
SFLPPGQPVT VTEEELEFLR SVVPPPPEGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.24e-08NF-YB family protein