PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG051820.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 240aa    MW: 26563.8 Da    PI: 8.7437
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG051820.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.44.5e-17104153255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r +h++ E+rRR +iN++++ Lr+llP++    ++K +Ka+ L +++eYI+ Lq
  TRIDC6BG051820.4 104 RSKHSATEQRRRTKINDRLDILRDLLPNC----DQKRDKASFLLEVIEYIRLLQ 153
                       899*************************9....9*****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
AASSAPGLGE HVLPGGVGTF SIRQVPDAQR RVEAGIGREP SVSVSHGSRM EIAHEARSGI  60
MVRSAPPTPT MWQDSSTDNK RSRGSRAEGR SSGSSADQDP SSPRSKHSAT EQRRRTKIND  120
RLDILRDLLP NCDQKRDKAS FLLEVIEYIR LLQEKCQKYE SGIPEQNNVD ANCMPWVCID  180
TVRYAVFLPE TKAGLLDSNL TFSFDLFILG RTKCTTDHVG GTHRTSVKPK EEAYQLPQRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.38e-21bHLH family protein