PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG052230.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 83aa    MW: 9201.46 Da    PI: 10.4082
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG052230.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.22.4e-29150251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      ri+n++nrqvtfskRr g+lKKA+ELS+LCdaev +++fsstg+l+e+ss
  TRIDC6BG052230.8  1 RIDNSTNRQVTFSKRRGGLLKKAKELSILCDAEVGLVVFSSTGRLHEFSS 50
                      79**********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
RIDNSTNRQV TFSKRRGGLL KKAKELSILC DAEVGLVVFS STGRLHEFSS TNMKSVIDRY  60
TKAKEEQPGV NATSEIKVSM HSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.17e-36MIKC_MADS family protein