PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG052420.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 220aa    MW: 23651.6 Da    PI: 7.9136
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG052420.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.71.5e-141459148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd++lv     +G  +W+++++  g   ++k+c++rw +yl
  TRIDC6BG052420.4 14 KGPWTAEEDQKLVAFLLSHGHCCWRLVPKLAG--QCGKSCRLRWTNYL 59
                      79*****************************9..7***********97 PP
2Myb_DNA-binding52.41.2e-1668111447
                       S-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqky 47 
                        + +E++l +d++ qlG++ +W++Ia++++ gRt++++k++w+++
  TRIDC6BG052420.4  68 LSDDEEKLVIDLHSQLGNRcRWSKIAARLP-GRTDNEIKNHWNTH 111
                       589***************************.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGRQPCCEKV GLKKGPWTAE EDQKLVAFLL SHGHCCWRLV PKLAGQCGKS CRLRWTNYLR  60
PDLKRGLLSD DEEKLVIDLH SQLGNRCRWS KIAARLPGRT DNEIKNHWNT HIRKKLKKMG  120
LDPVTHQPVA ASRADPLQDP QQDPHCDGKA SSQESAGYGT GASAEEEALT SAEPKQGATC  180
SASTASAVSP SPCSSSSASA SASAATPGGA DVDWPDPLDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.11e-76MYB family protein