PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG053780.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 161aa    MW: 18127.5 Da    PI: 8.0093
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG053780.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.84.7e-078342955
               AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55
                      ++++lg+++t+++Aa+a++ a++k++g
  TRIDC6BG053780.4  8 ASVYLGSYDTEQKAARAYDVAALKFFG 34
                      789*******99***********9987 PP
2AP250.74.3e-1677128155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++ k+grW A+I       g ++ ++lg+f t+eeAa+a++ a+ +++g
  TRIDC6BG053780.4  77 SIYRGVTRRQKDGRWQARIGLiA---G-TRDIYLGTFKTEEEAAEAYDIAAIEIRG 128
                       57****************88832...2.5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MVFQYGGASV YLGSYDTEQK AARAYDVAAL KFFGLNTKLN FSISEYEKEL ADIQDMSPEE  60
CVTYLRRRSS CFSRGASIYR GVTRRQKDGR WQARIGLIAG TRDIYLGTFK TEEEAAEAYD  120
IAAIEIRGKN AVTNFDRSNY MDRGMHCIEG AGLKLLATKP E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16687RRRSSCFSRGASIYRGVTRRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.15e-48AP2 family protein