PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG053780.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 106aa    MW: 11967.6 Da    PI: 9.2049
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG053780.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.7e-162273155
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      s y+GV+++ k+grW A+I       g ++ ++lg+f t+eeAa+a++ a+ +++g
  TRIDC6BG053780.6 22 SIYRGVTRRQKDGRWQARIGLiA---G-TRDIYLGTFKTEEEAAEAYDIAAIEIRG 73
                      57****************88832...2.5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MSPEECVTYL RRRSSCFSRG ASIYRGVTRR QKDGRWQARI GLIAGTRDIY LGTFKTEEEA  60
AEAYDIAAIE IRGKNAVTNF DRSNYMDRGM HCIEGAGLKL LATKPE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11132RRRSSCFSRGASIYRGVTRRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-26AP2 family protein