PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG053930.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 389aa MW: 43708.7 Da PI: 8.5404

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG053930.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.7	4.5e-53	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 + pGfrFhPtdeelv +yLk+k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++ TRIDC6BG053930.1 16 MLPGFRFHPTDEELVRFYLKRKIQQKSLPI-ELIRQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIY 107 579*************************.89***********9888999************************************ PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ +++ +glkk+Lvfykgra kg+ktdW+mhe+rl TRIDC6BG053930.1 108 SSdGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 143 966677**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEEIRSDDME KQDEVMLPGF RFHPTDEELV RFYLKRKIQQ KSLPIELIRQ LDIYKFDPWD 60 LPKLASTGEK EWYFYCPRDR KYRNSTRPNR VTGAGFWKAT GTDRPIYSSD GSKCIGLKKS 120 LVFYKGRAAK GVKTDWMMHE FRLPSLTDPS LPQKKPLEKT IPPNDSWAIC RIFKKTNATA 180 QRALSHSWVS PPLPSTNGAY IPPHLQTTHR SRHSSENTSS AMTNIISSNI QFSSSGYFPS 240 IISSCQSTLN IIDSISRPAT PIVLPPSDAE HQAMSILSAI PLDLPAGMDI ASMVMNASPI 300 TLSNMDRSAP MNIEFAQPQQ CNSNSNMISR CVVDLPDIGN NVGGAPRSMN FPFNMQGPLS 360 DDWRATVPWD SLPCTTEAST NYQPTKCYT

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEEIRSDDME KQDEVMLPGF RFHPTDEELV RFYLKRKIQQ KSLPIELIRQ LDIYKFDPWD  60
LPKLASTGEK EWYFYCPRDR KYRNSTRPNR VTGAGFWKAT GTDRPIYSSD GSKCIGLKKS  120
LVFYKGRAAK GVKTDWMMHE FRLPSLTDPS LPQKKPLEKT IPPNDSWAIC RIFKKTNATA  180
QRALSHSWVS PPLPSTNGAY IPPHLQTTHR SRHSSENTSS AMTNIISSNI QFSSSGYFPS  240
IISSCQSTLN IIDSISRPAT PIVLPPSDAE HQAMSILSAI PLDLPAGMDI ASMVMNASPI  300
TLSNMDRSAP MNIEFAQPQQ CNSNSNMISR CVVDLPDIGN NVGGAPRSMN FPFNMQGPLS  360
DDWRATVPWD SLPCTTEAST NYQPTKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG053930.1