PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG054700.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 389aa    MW: 43344.1 Da    PI: 9.0406
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG054700.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP70.81.6e-22166171
           E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                      rk+ksL+ll+++f++l+ +   + + l++++++L    v  +rRRiYDi+NVLe+++++++k+kn+++w+g
  TRIDC6BG054700.3  1 RKQKSLGLLCSNFVALYDRDGVESIGLDDASRRL---GV--ERRRIYDIVNVLESVGILARKAKNRYSWIG 66
                      79*****************999************...**..****************************98 PP
2E2F_TDP79.62.9e-25145225171
           E2F_TDP   1 rkeksLrlltqkflklleksee.givtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 
                       rkeksL+lltq+f+kl+ + e+  +++l+e+ak L+ e     ++++k+RR+YDi+NVL++l+liek    ++k+++rw g
  TRIDC6BG054700.3 145 RKEKSLGLLTQNFVKLFLTMEQvSTISLDEAAKFLLGEdheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFRWLG 225
                       79*****************9999**************9*******************************999*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
RKQKSLGLLC SNFVALYDRD GVESIGLDDA SRRLGVERRR IYDIVNVLES VGILARKAKN  60
RYSWIGFGGV PMALRELKER ALREKSGLAP PPAEELSAAN MSDDEDDDKL GVPEAETEGE  120
KLSQTVDNPS DMPDAPPCRL RSDHRKEKSL GLLTQNFVKL FLTMEQVSTI SLDEAAKFLL  180
GEDHEESNMR TKVRRLYDIA NVLSSLKLIE KTQVDTRKPA FRWLGMAGKP KAENGVTIVA  240
SPASKTLSNK RVFGTELTNI GINRSKLEPT IQKKAKLAQG GADILKNHNV AAQKQPGQVN  300
KSGFVYGPFH PSCARKQEPD ECNNVGQKAI AHDWESLADS FRPQYQNPAL GDLFAHYVDA  360
WKSWYFEFSQ GSSIMQQHLG SSVNNKRFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-100E2F/DP family protein