PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG055420.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 316aa MW: 34041.4 Da PI: 8.2292

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG055420.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.7	1e-13	120	171	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +rr+h ++Er+RR+++N+ ++ Lr+ +P++ ++++ + a+i+ A++++k+L+ TRIDC6BG055420.2 120 QRRNHIAVERNRRRQMNDYLAVLRSAMPPS---YAQRGDQASIVAGAINFVKELE 171 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
EAVVFPHEHL ACSTDKVAAA MSMYAPSLGR GISIDELEEK GGVVLQDQEE VLGATYWAAA 60 VEGNWDEKHC WAGPESSPPP AVAPTAPAAS GRGKASSSAA ARRRRRRPKA VKNREETESQ 120 RRNHIAVERN RRRQMNDYLA VLRSAMPPSY AQRGDQASIV AGAINFVKEL EQLLQSLEAQ 180 KRRRAQLTST PPFAGFFTFP QYSAGAGAGT ADGSGDAESR RGARPGVADV EVAVAESHAS 240 VKVLAPRRPR QLVRMVVAMQ CLGLTVLHLN ATATADQLVF YSFSLRMEDE CRLSTVDEIA 300 AAVHQMVAEV HAGGPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	107	RRRRRR
2	122	132	RNHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	3e-47	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG055420.2