PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG055420.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 290aa    MW: 31169.3 Da    PI: 9.518
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG055420.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.89.2e-1494145155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +rr+h ++Er+RR+++N+ ++ Lr+ +P++   ++++ + a+i+  A++++k+L+
  TRIDC6BG055420.3  94 QRRNHIAVERNRRRQMNDYLAVLRSAMPPS---YAQRGDQASIVAGAINFVKELE 145
                       79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
AVVFPHEHLA CSTDKVAAAM SMYAPSLGRG ISIDELEEKG GVVLQDQEES SPPPAVAPTA  60
PAASGRGKAS SSAAARRRRR RPKAVKNREE TESQRRNHIA VERNRRRQMN DYLAVLRSAM  120
PPSYAQRGDQ ASIVAGAINF VKELEQLLQS LEAQKRRRAQ LTSTPPFAGF FTFPQYSAGA  180
GAGTADGSGD AESRRGARPG VADVEVAVAE SHASVKVLAP RRPRQLVRMV VAMQCLGLTV  240
LHLNATATAD QLVFYSFSLR MEDECRLSTV DEIAAAVHQM VAEVHAGGPC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17681RRRRRR
296106RNHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-47bHLH family protein