PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG055880.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 327aa MW: 36140.7 Da PI: 5.3995

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG055880.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.3	1.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l d+++++G g+W++ ++ g++R++k+c++rw +yl TRIDC6BG055880.2 14 KGPWTSEEDQKLTDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	58.5	1.5e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC6BG055880.2 67 RGKFTPEEEQTILQLHSVLGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MGRSPCCDEN GLKKGPWTSE EDQKLTDYIE KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF TPEEEQTILQ LHSVLGNKWS AIAKHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DFFAALPQLI ALANLRQLVE QRPCDDQSGS QLQANAVQAA KLEYLQCLLQ 180 SAAAIATSPS SSSINTMPTD LEQIGLLSPS QMSSLSSMSS PRIMEGVNGQ DLVSGQVPDI 240 QIPSSSFFEH EQAIINCTNK NSDYSANSGE GEKLLLLSED SLPPLADFPI CNLGDACSTS 300 SCEAVGNSTQ LPIWSDSFYD EFMSEFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-103	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG055880.2