PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG055910.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 365aa MW: 40344.1 Da PI: 4.8935

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG055910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.6e-19	48	95	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d+++++G g+W++ ++ g++R++k+c++rw +yl TRIDC6BG055910.1 48 KGPWTPEEDQKLTDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 95 79********************************************97 PP
2	Myb_DNA-binding	58.2	1.8e-18	101	146	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC6BG055910.1 101 RGKFTPEEEQTILQLHSVLGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 146 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
TGNPKDQARE ERQIALSPSF PPAPSYPNSI SILSMGRSPC CDENGLKKGP WTPEEDQKLT 60 DYIEKHGHGS WRALPKLAGL NRCGKSCRLR WTNYLRPDIK RGKFTPEEEQ TILQLHSVLG 120 NKWSAIAKHL PGRTDNEIKN FWNTHLKKKL IQMGFDPMTH RPRTDFFAAL PQLIALANLR 180 QLVEQRPWDD QSASQLQADA VQAAKLEYLQ CLLQSAAAIA TSPSSSSINT IPTDLEQIGL 240 LSPSQMSSLS SLSSPRIMEG INGQDLVSEQ VPDIQIPSSS FFEHEQPIIN GTNQNSDYSA 300 NSGEGENGTQ KPLLLSEDSL PPLTDFPISN LGDACSTSSC DAEGNSTQLP IWSDSFYDEF 360 MSEFA

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

TGNPKDQARE ERQIALSPSF PPAPSYPNSI SILSMGRSPC CDENGLKKGP WTPEEDQKLT  60
DYIEKHGHGS WRALPKLAGL NRCGKSCRLR WTNYLRPDIK RGKFTPEEEQ TILQLHSVLG  120
NKWSAIAKHL PGRTDNEIKN FWNTHLKKKL IQMGFDPMTH RPRTDFFAAL PQLIALANLR  180
QLVEQRPWDD QSASQLQADA VQAAKLEYLQ CLLQSAAAIA TSPSSSSINT IPTDLEQIGL  240
LSPSQMSSLS SLSSPRIMEG INGQDLVSEQ VPDIQIPSSS FFEHEQPIIN GTNQNSDYSA  300
NSGEGENGTQ KPLLLSEDSL PPLTDFPISN LGDACSTSSC DAEGNSTQLP IWSDSFYDEF  360
MSEFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-104	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG055910.1