PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG056050.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 188aa    MW: 19583 Da    PI: 8.7928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG056050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-19108159156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                       s+++GVr+++ +g+W+AeIrdp     +   r +lg+f+ta +Aa+a++ a+++++g+
  TRIDC6BG056050.1 108 SKFRGVRQRS-WGKWAAEIRDP-----HraVRKWLGTFDTAVDAARAYDLAALEFRGH 159
                       79*****999.**********7.....338**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MAPRLERGGS GFQLPNSELE DSLFLRALIS VVNGDAVVPT LHLEPSSTPH IAAAVPACAS  60
CGVDGCIGCM FVAAAAPAGS SSEGEGCSAA SFVKGGGVGK ITRRRSWSKF RGVRQRSWGK  120
WAAEIRDPHR AVRKWLGTFD TAVDAARAYD LAALEFRGHR ARLNFPDVAA SASASSSFSD  180
SSSAAAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.13e-21ERF family protein