PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG056120.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 241aa    MW: 24683.7 Da    PI: 10.0422
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG056120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.4e-20115166156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                       s+++GVr+++ +g+W+AeIrdp     +   r +lg+f+ta eAa+a++ a+++++g+
  TRIDC6BG056120.1 115 SKFRGVRQRP-WGKWAAEIRDP-----HraVRKWLGTFDTAAEAARAYDVAALEFRGH 166
                       79********.**********7.....338**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
LYVAMVPRLE RGGFQLPNSE QENSLFLRAL ISVVSGDTAA PAPHQLAPST PPFAPAPATA  60
AAACARCGVD GCLGCEFVAA AAATTGSSSE GEECSAASFV KNGGVGKRRA GGGGSKFRGV  120
RQRPWGKWAA EIRDPHRAVR KWLGTFDTAA EAARAYDVAA LEFRGHRAKL NFPASSSSAS  180
ASAAKAREPS REVRVKCVVA GARSAAAGAG EAGGAGAGDL GRAARDHDDG RRQLLVQPQA  240
M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.14e-19ERF family protein