PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG057040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 349aa    MW: 38373.2 Da    PI: 8.5827
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG057040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS196.12.3e-6066285120313
              GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp....gEalaVnlvl 208
                       +qG+QWpaLlqaLa Rp+g+p +R+Tgvg+p+++++++l+++g++La+fA +++v+f+++ l a +l dle+ +L+ +      E++aVn+v+
  TRIDC6BG057040.1  66 KQGMQWPALLQALALRPGGTPLFRLTGVGPPQPDETDALQQMGWKLAQFAYTIRVDFQYRGLGAATLVDLEPFMLQPEDsneePEVIAVNSVF 158
                       79************************************************************999**********766666679********* PP

              GRAS 209 qlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak........................... 274
                       ++hrll++++++e+    vL +v+ ++P++v+vve+e +hns++Fl+rf++  +yys++fds+                              
  TRIDC6BG057040.1 159 EMHRLLAQPGAMEK----VLGTVRAVRPRIVTVVEHEGNHNSGTFLDRFTDH-YYYSTMFDSWTRCtttppcsipsraaapaahpkshrrevv 246
                       **************....********************************97.79********544489***********************8 PP

              GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetle 313
                       +p+++ +++++++++lgr+i+nvvacegae++erhetl+
  TRIDC6BG057040.1 247 APAAAGTDQVMSEVYLGRHICNVVACEGAEHTERHETLG 285
                       89999*******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MRWRREWRSP PGQNCTTTQE KREAASKSAK SVGRNGWSSS RRMGFSAAAR SSLCFLATAR  60
RSTTFKQGMQ WPALLQALAL RPGGTPLFRL TGVGPPQPDE TDALQQMGWK LAQFAYTIRV  120
DFQYRGLGAA TLVDLEPFML QPEDSNEEPE VIAVNSVFEM HRLLAQPGAM EKVLGTVRAV  180
RPRIVTVVEH EGNHNSGTFL DRFTDHYYYS TMFDSWTRCT TTPPCSIPSR AAAPAAHPKS  240
HRREVVAPAA AGTDQVMSEV YLGRHICNVV ACEGAEHTER HETLGPRGVA GEEAESARMA  300
AHSTSPDRCG RNAADRRSEH AVAAAAMAAD GVQSKESHDR LDRCAILRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-73GRAS family protein