PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG057930.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 267aa    MW: 28255.3 Da    PI: 5.6361
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG057930.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-1867116255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  TRIDC6BG057930.2  67 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLRG 116
                       69****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
TLGVQRRSQI KEVKFVSQRG ASSVSVIGRE MVKSAQQQPQ GGLGGDGGNA VAARQGGGGG  60
GRQQQQQYKG VRMRSWGSWV SEIRAPNQKT RIWLGSYSTA EAAARAYDAA LLCLRGSAAD  120
LNFPVHLPFH VPAGAMSPKS IQRVAAAAAA SASSSPLQPP HTMASSASWP GAAPPCGYGD  180
NASSFGSPED RSARHSNADD DETMAHGDDG VDYDALADID AFFQSPKCMD YAMMMDPCST  240
FFAPAPMAPV EWEEEGEISL WSFSSYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-26ERF family protein