PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG058680.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 230aa    MW: 25113.2 Da    PI: 10.7383
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG058680.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA1056.3e-3373129158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       dep++VN+KQy++Il+RRq Rakle+++kl +k+rkpylheSRh hA++R+RgsgGrF
  TRIDC6BG058680.4  73 DEPIFVNPKQYNGILRRRQLRAKLEAQNKL-TKNRKPYLHESRHLHAMKRARGSGGRF 129
                       79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MRSTLTFGDK HSLYASQNTD YGHPMACISY PFNDSGSGVW AAYGSRAMFQ PLMPGGGASA  60
TARVPLPVEL AADEPIFVNP KQYNGILRRR QLRAKLEAQN KLTKNRKPYL HESRHLHAMK  120
RARGSGGRFL NSKQLKQQQQ QSGSACTKVI ADGANSLGST HLRLGSGAAG DRTNSASKAM  180
SSQENSKRVA APAPAFTMIQ AARKDDDFFH HHAHHLSFSG HFGQSSDRYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.12e-36NF-YA family protein