PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG058680.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 189aa    MW: 20624.3 Da    PI: 10.8448
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG058680.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.64.4e-333288158
         CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                      dep++VN+KQy++Il+RRq Rakle+++kl +k+rkpylheSRh hA++R+RgsgGrF
  TRIDC6BG058680.5 32 DEPIFVNPKQYNGILRRRQLRAKLEAQNKL-TKNRKPYLHESRHLHAMKRARGSGGRF 88
                      79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
IYCCCASFQP LMPGGGASAT ARVPLPVELA ADEPIFVNPK QYNGILRRRQ LRAKLEAQNK  60
LTKNRKPYLH ESRHLHAMKR ARGSGGRFLN SKQLKQQQQQ SGSACTKVIA DGANSLGSTH  120
LRLGSGAAGD RTNSASKAMS SQENSKRVAA PAPAFTMIQA ARKDDDFFHH HAHHLSFSGH  180
FGQSSDRYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-36NF-YA family protein