PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG058690.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 328aa MW: 36134.8 Da PI: 8.3874

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG058690.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.7e-12	96	147	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r +h ++Er+RR+++N+ + Lr+l+P + + + + a+i A++Y+k+L+ TRIDC6BG058690.2 96 QRLTHIAVERNRRRQMNEYLGVLRSLMPAS---YVHRGDQASIIGGAINYVKELE 147 699*************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
DQAERVWRWR PWCSRKGSSG AAPWLPKELE EAVGFGAGMA TGTAVAWTWT EATPIAAPPL 60 RAPKPRKEVP PCRRAAGRRK RRRARSVKNI EEAESQRLTH IAVERNRRRQ MNEYLGVLRS 120 LMPASYVHRG DQASIIGGAI NYVKELEQLV QSLEAHRHAP LRDDCPVSGD VSTAVVPFAD 180 FFTFPQYTMS VRHAPEAAAA TAEAADALAD DGRGNAADGD TTSGSKQSAV ADIEVTIVES 240 HASLKVLSRR RPRQLLRIVA GLQGHRLAVL HLNATSAGHM ALYCLSLKQV EDDCRLSSVD 300 DIAAAVHRIV ETIEREEEEE QRQQQSCT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	83	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	2e-63	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG058690.2