PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG059300.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 175aa    MW: 18690.4 Da    PI: 9.2777
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG059300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.22.8e-202269249
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      rie++  rqv fskRr+g++KK +EL vLC+aeva ++fs+ gk + +
  TRIDC6BG059300.1 22 RIESEEARQVCFSKRRAGLFKKVSELAVLCGAEVAAVVFSPAGKAFSF 69
                      8******************************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
RSMSMAPKRK LSMGRQKIEI RRIESEEARQ VCFSKRRAGL FKKVSELAVL CGAEVAAVVF  60
SPAGKAFSFG HPSVEAILDR FIPSAAQLGA AGAGAGLGAA GDRNLAELNR QYGQLREQLE  120
AEKARKERAD EAMAKERAKG SQAAAWLDAD LRDLGEEELM AFAAALADVQ AAVSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.16e-26M-type_MADS family protein