PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG060280.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 224aa    MW: 24531.9 Da    PI: 9.8563
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG060280.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-182270355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++G+r+++ +g+W+AeIrdps+     r++lg+f +aeeAa+a++  +++++g
  TRIDC6BG060280.2 22 FRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFNSAEEAARAYDVEARRIRG 70
                      8*******.**********965...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MTTAGFDGPA QRSAKRKRKN EFRGIRQRPW GKWAAEIRDP SKGVRVWLGT FNSAEEAARA  60
YDVEARRIRG KKAKVNFPEE PTVPQKRRAC PAAPKVPKSS AAQEPTVIPA VNNLANPNAF  120
VYPSADFASK QPLVQPDNVP FVPAINSAAP VEAPVMNMYS DQGSNSFGCS DLGWEYDTKT  180
PDISSIAPIS TIAEGAETAL LQSNTYNPWC LLSWRTMLLI LNLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.17e-35ERF family protein