PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG060560.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 221aa    MW: 23994.3 Da    PI: 9.7351
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG060560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.61.8e-151462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEd +l+ ++ + G+g +W + ++++g++R++k+c++rw++yl
  TRIDC6BG060560.1 14 KGPWSPEEDAKLKAYIDENGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62
                      79*********************************************97 PP
2Myb_DNA-binding39.99.5e-1369111246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g +T+eE+ ++  +    G++ W+ Ia+ ++ gRt++++k++w++
  TRIDC6BG060560.1  69 GDFTEEEEHIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                       789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MGRAPCCDKA TVKKGPWSPE EDAKLKAYID ENGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGD FTEEEEHIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGK  120
RAPSRRLQRA NQDAPMPYSY LAAGGGSASS SGNASGTTAA LSSSALERIQ LHMRLQGLYS  180
AFGCGASNAP PQWPKLEPPT DAVAMTTVSH GHSLAAADVV E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.18e-87MYB family protein