PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG062600.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 360aa MW: 37038.6 Da PI: 11.8316

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG062600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27	7.9e-09	181	219	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC6BG062600.1 181 RRERIAERMKALQELVPSA-----NKTDKASMLDEIIDYVKFLQ 219 9***************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
CSPPAAKCTA AGRGRGRGRT TSSSRCCPRC RRPGPSSAPS GPPGSSRRPA RPRPTATLGS 60 TSPPSSPPAS ATTRSAAAEG TTSRRRPCSP ATASTAGASC PCRCSLTGPG RTCRGLTRRC 120 STGSGPPECM APAPLSRRSV RPAQCRRQRR RAERRRRRGS ASGRGEGRPP TPTASPSVYL 180 RRERIAERMK ALQELVPSAN KTDKASMLDE IIDYVKFLQL QVKVLSMSRL GGAAAVGPLV 240 AGLSSESSGN GNGTSSSGDG NGDDDNGGST LRATEQQVAR LMEEDMGTAM QYLQGKGLCL 300 MPISLASVIS SATSSSLRSA TRPAGNAGGP LHEGGSPASP RLVNGVGADG SRTIRDGGRQ

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

CSPPAAKCTA AGRGRGRGRT TSSSRCCPRC RRPGPSSAPS GPPGSSRRPA RPRPTATLGS  60
TSPPSSPPAS ATTRSAAAEG TTSRRRPCSP ATASTAGASC PCRCSLTGPG RTCRGLTRRC  120
STGSGPPECM APAPLSRRSV RPAQCRRQRR RAERRRRRGS ASGRGEGRPP TPTASPSVYL  180
RRERIAERMK ALQELVPSAN KTDKASMLDE IIDYVKFLQL QVKVLSMSRL GGAAAVGPLV  240
AGLSSESSGN GNGTSSSGDG NGDDDNGGST LRATEQQVAR LMEEDMGTAM QYLQGKGLCL  300
MPISLASVIS SATSSSLRSA TRPAGNAGGP LHEGGSPASP RLVNGVGADG SRTIRDGGRQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	151	RRQRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-40	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG062600.1