PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG062600.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 198aa    MW: 20534.9 Da    PI: 9.1946
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG062600.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.4e-121257555
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  TRIDC6BG062600.3 12 HSIAERLRRERIAERMKALQELVPSA-----NKTDKASMLDEIIDYVKFLQ 57
                      99***********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
QRARRGQATD PHSIAERLRR ERIAERMKAL QELVPSANKT DKASMLDEII DYVKFLQLQV  60
KVLSMSRLGG AAAVGPLVAG LSSESSGNGN GTSSSGDGNG DDDNGGSTLR ATEQQVARLM  120
EEDMGTAMQY LQGKGLCLMP ISLASVISSA TSSSLRSATR PAGNAGGPLH EGGSPASPRL  180
VNGVGADGSR TIRDGGRQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11722RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.12e-41bHLH family protein