PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG062710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 674aa    MW: 72651.5 Da    PI: 6.5573
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG062710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.65.7e-28212265155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       +pr++W+ eLH++Fv av++L G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  TRIDC6BG062710.1 212 RPRVVWSVELHRKFVAAVNHL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 265
                       59*******************.********************************8 PP
2Myb_DNA-binding36.21.4e-11214264148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v av+ lG +   +k+I + m+ +++t++++ s++qky+
  TRIDC6BG062710.1 214 RVVWSVELHRKFVAAVNHLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 264
                       678********************************99*************7 PP
3Response_reg76.97.5e-26231311109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge +++ + + 
  TRIDC6BG062710.1  23 VLAVDDDPVCLKVLETLLRRCQY-HVTATNQAVIALRMLRENRdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKTVMKGIT 113
                       799********************.***************99999********************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel++
  TRIDC6BG062710.1 114 HGACDYLLKPVRIEELRN 131
                       ****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    
MRTDVRRGAA AAGRDQFPVG MRVLAVDDDP VCLKVLETLL RRCQYHVTAT NQAVIALRML  60
RENRDMFDLV ISDVHMPDMD GFKLLELVGL EMDLPVIMLS VNGETKTVMK GITHGACDYL  120
LKPVRIEELR NIWQHVVRRK FSTRDSVNLD TYEECNKPPS ADSDYVYGQV TCGSPDQSGR  180
PSKKRKEYHS EEEDEDEDSS GQDNDDPSAP KRPRVVWSVE LHRKFVAAVN HLGIDKAVPK  240
RILELMNVEK LTRENVASHL QKYRLYLRRL SAVASQQAGI VAALGGRDPF LRMDAFEGLQ  300
GYQAFTSPAA LSTFSAHGLL NSPRNNQTAV VIQGVATSRS IPTGSSSCTT NPLIGDAAKY  360
HLSLPGNQHG NLGQGLATSL GQAQLQQKWM NEGSGDLSTI LSGNSRGNGM PRMLPSVTSN  420
PLLPPDLVEC TQAKVAIQPS VRAPSASVEI LEGAIGASSG PLESRVSQQS ALPSSGFSAN  480
MLPVHGSFNN NGASFSSNGA TRLDDAFSAS FRPTNDLVVA RGTKVGASSF GGAVHLSPDT  540
EQKYLSFGSS DSLLDPKLMW SSSHLPSNIS AHHSMSQRSN NCSIDSSHGG RMFGQTSASA  600
STAAPQAKFD ILFSGDTSMA RNASESGTQR LQSELSSSTC SFDSLLNSMI KVEKDDAAFG  660
DDLGCDFYSL GACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-109ARR-B family protein