PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG065410.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 295aa    MW: 31339.2 Da    PI: 8.5932
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG065410.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.61.7e-18215248134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C++C+  kTp+WR gp g+ktLCnaCG++y++ +
  TRIDC6BG065410.2 215 CTHCQIDKTPQWRAGPLGPKTLCNACGVRYKSGR 248
                       *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDMAQLEWLS GLFDDTSIPH EPAFACAAPI IRASALSANA GVVLPDKMED ALFRSSSPTS  60
VLEDGGANNA NMNMNNNSGG SSASSTSSSA SSSSESFSGS GRPWSVPLSP RPEPPVLVIP  120
ARARSKRSRA SAFPAAIRAA VPAPEATILV PTPMFSSTSS YSEEPECIAE SNSQPKKKKK  180
AKRPTPPVTS DAEGDADYEE GSGGAALAPG EVRRCTHCQI DKTPQWRAGP LGPKTLCNAC  240
GVRYKSGRLF PEYRPAASPT FVPAIHSNSH KKVVEMRQKV EPKGDDLLQF IRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.19e-39GATA family protein