PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG065810.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 162aa    MW: 18551.2 Da    PI: 10.3956
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG065810.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.43.5e-50101471128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrF P+deelv++yL+ kv+++++    + ++ evd++ +ePw+Lp  +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd+ 
  TRIDC6BG065810.3  10 LPPGFRFYPSDEELVCHYLHGKVANQRFAGgaTGTMVEVDLHVHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATRSGYWKATGKDRV 102
                       79*************************65411346***************87788999*********************************** PP

               NAM  92 vlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + s         + + vg++ktLvfy+grap+g+kt Wvmhe+r+
  TRIDC6BG065810.3 103 IRSPrssssrsgRAAIVGMRKTLVFYRGRAPNGSKTCWVMHEFRI 147
                       **99665555444444***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MGLRDIEMTL PPGFRFYPSD EELVCHYLHG KVANQRFAGG ATGTMVEVDL HVHEPWELPD  60
VAKLSTNEWY FFSFRDRKYA TGLRTNRATR SGYWKATGKD RVIRSPRSSS SRSGRAAIVG  120
MRKTLVFYRG RAPNGSKTCW VMHEFRIENP HSPPKVYLIG NI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.14e-63NAC family protein