PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG066310.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 224aa    MW: 23856.7 Da    PI: 7.5085
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG066310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-1753105155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + ++GVr++ + grWv+e+r+p ++   +r +lg++ tae Aa+a++aa++ l+g
  TRIDC6BG066310.1  53 PVFRGVRRRGSAGRWVCEVRVPGDR--GTRLWLGTYFTAEAAARAHDAAMLMLRG 105
                       579******************9555..5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
EPSTGSRPAA MGMSLEHSSS ASSSSTTERG GTARPWPPKR PAGRTKFRET RHPVFRGVRR  60
RGSAGRWVCE VRVPGDRGTR LWLGTYFTAE AAARAHDAAM LMLRGRSAAC LNFRDSAWLL  120
SVPPAFSNLS DVRHAAVQAV ADFLRRPEAT DAAAGAAQEV TSSVAVPSAA ACSVPSFETA  180
QTSGDATFEA PAALSMDMFD LDCLFGETDS DTNYYADLAH GLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.13e-30ERF family protein