PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG068490.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 245aa    MW: 28003.5 Da    PI: 6.9888
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG068490.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.94.5e-10369457
                      -SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC............TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  4 RttftkeqleeLeelFek.nrypsaeereeLAkkl............gLterqVkvWFqNrRakekk 57
                      R +ft  ++  +ee+ +  n  p++ ++++L++               ++ +qV +WFqNrR+k+k+
  TRIDC6BG068490.3  3 RIRFTLAEVSKMEEVLRDlNAMPKRPAIQKLTADFnaspdrsgddkvPVQYNQVHTWFQNRRYKQKR 69
                      889**************99**************************9999*****************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGRIRFTLAE VSKMEEVLRD LNAMPKRPAI QKLTADFNAS PDRSGDDKVP VQYNQVHTWF  60
QNRRYKQKRR GERPPAQVKK MLPTGAEAQH PASYWVHSSS PPNSESHSGN SSSDGHLVQL  120
EAKSPRNGAW YDVAAIQSCR FSETGDQEVQ VWFSGFWAEE EEWINVCKSL RLRSLPCVAR  180
ECVDVLPGDL ILCYQDGKEQ ALYFDAHVLE VERRTHDIRG CLCSFLVRYD HDHSEVTLRL  240
SNTVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16269NRRYKQKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.35e-67HB-other family protein