PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG069070.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 936aa MW: 105450 Da PI: 7.3969

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG069070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.3	1.5e-19	324	408	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6BG069070.1 324 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 408 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
LPTSPPPSPS LQQRRPPPPP PPPPPPPYPP SPARSSSHLP SPPSPITRTG SRPKPLAPRS 60 SPHSNPDLDS HSTSAGARSR RPTPAMEEYL AAYTAKEDPA TPAQPAVQTA SAPPARAAGG 120 HAPQAPAAAA LPTSSRVVAK SNSSSAKTPG SSANKRVIYI VAGDDGSHVP ILRQVQVYGE 180 EAIKGYEKTP APACNVVKQA RRDAGKQPVR RPRIQLLSNN REERSADFMD DDEEAALALQ 240 VKLERSASYA DRSLQLQTAE EHDVMEIDDI SSDDTGSESD SDISSGSESE KDEGKFFYPA 300 PEALGTVKAP QVGMKFPTLE DAHEYYNTYA LQTGFVVVRG RNYKRQRFQL DCNRNRKVKL 360 VEDLNLKRKR KKNVIEKTNC QAKIIVKLIK GEWVIAAVQN EHNHPLSPSR SFTRFLTSQK 420 HMSPEERSFS RVLQQSRVPP GEILKILRRM SGFFRELPSK EKQALILQSA EQWRKANIDV 480 EKTLNHLEEL QLQDPCFFYT VQKDEDGMLR SIFWTDARSR MDYEIFGDFV SFDTTFSTNR 540 HSMPFVPITG MNNRGRTIVL GCALLQDRKA ETYKWMLQTF LQEMGGGQTP RSVITSQDEA 600 MAKAIAEVMP QARHRFCRWN GKAQEKMAAF VAARGNMKAE LDILVDNSLT ETEFEQGWSA 660 LIQRHDASEN EYLQLLWEMR KTWAPVYFMQ DFFPFVVSAR GSQGAFSLFK ENVLPKDKIE 720 NLIEKYEEMQ DKIKKTDEED ALEAATEPSC FSLQPIERHA SRVYTRQIFL KVQKELLHST 780 AFKVQEIERG ALYRLDKASS YENPEYDRDS FEVLIEPGVT DTYTCQCAKF ARDGILCCHV 840 FRLFTQFGID EIPEKYIVAR WTDGFREEQL ERREEGRLVA AARREEDAAR YAALMSKAAG 900 IGREICGDGA KCDAFMLELD RIREKMATMA MANDHV

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

LPTSPPPSPS LQQRRPPPPP PPPPPPPYPP SPARSSSHLP SPPSPITRTG SRPKPLAPRS  60
SPHSNPDLDS HSTSAGARSR RPTPAMEEYL AAYTAKEDPA TPAQPAVQTA SAPPARAAGG  120
HAPQAPAAAA LPTSSRVVAK SNSSSAKTPG SSANKRVIYI VAGDDGSHVP ILRQVQVYGE  180
EAIKGYEKTP APACNVVKQA RRDAGKQPVR RPRIQLLSNN REERSADFMD DDEEAALALQ  240
VKLERSASYA DRSLQLQTAE EHDVMEIDDI SSDDTGSESD SDISSGSESE KDEGKFFYPA  300
PEALGTVKAP QVGMKFPTLE DAHEYYNTYA LQTGFVVVRG RNYKRQRFQL DCNRNRKVKL  360
VEDLNLKRKR KKNVIEKTNC QAKIIVKLIK GEWVIAAVQN EHNHPLSPSR SFTRFLTSQK  420
HMSPEERSFS RVLQQSRVPP GEILKILRRM SGFFRELPSK EKQALILQSA EQWRKANIDV  480
EKTLNHLEEL QLQDPCFFYT VQKDEDGMLR SIFWTDARSR MDYEIFGDFV SFDTTFSTNR  540
HSMPFVPITG MNNRGRTIVL GCALLQDRKA ETYKWMLQTF LQEMGGGQTP RSVITSQDEA  600
MAKAIAEVMP QARHRFCRWN GKAQEKMAAF VAARGNMKAE LDILVDNSLT ETEFEQGWSA  660
LIQRHDASEN EYLQLLWEMR KTWAPVYFMQ DFFPFVVSAR GSQGAFSLFK ENVLPKDKIE  720
NLIEKYEEMQ DKIKKTDEED ALEAATEPSC FSLQPIERHA SRVYTRQIFL KVQKELLHST  780
AFKVQEIERG ALYRLDKASS YENPEYDRDS FEVLIEPGVT DTYTCQCAKF ARDGILCCHV  840
FRLFTQFGID EIPEKYIVAR WTDGFREEQL ERREEGRLVA AARREEDAAR YAALMSKAAG  900
IGREICGDGA KCDAFMLELD RIREKMATMA MANDHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	366	373	LKRKRKKN
2	368	372	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-74	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG069070.1