PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG069070.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 935aa MW: 105322 Da PI: 7.3969

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG069070.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.3	1.5e-19	323	407	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6BG069070.2 323 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 407 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 935 aa Download sequence
LPTSPPPSPS LQQRRPPPPP PPPPPPPYPP SPARSSSHLP SPPSPITRTG SRPKPLAPRS 60 SPHSNPDLDS HSTSAGARSR RPTPAMEEYL AAYTAKEDPA TPAQPAVQTA SAPPARAAGG 120 HAPQAPAAAA LPTSSRVVAK SNSSSAKTPG SSANKRVIYI VAGDDGSHVP ILRQVQVYGE 180 EAIKGYEKTP APACNVVKAR RDAGKQPVRR PRIQLLSNNR EERSADFMDD DEEAALALQV 240 KLERSASYAD RSLQLQTAEE HDVMEIDDIS SDDTGSESDS DISSGSESEK DEGKFFYPAP 300 EALGTVKAPQ VGMKFPTLED AHEYYNTYAL QTGFVVVRGR NYKRQRFQLD CNRNRKVKLV 360 EDLNLKRKRK KNVIEKTNCQ AKIIVKLIKG EWVIAAVQNE HNHPLSPSRS FTRFLTSQKH 420 MSPEERSFSR VLQQSRVPPG EILKILRRMS GFFRELPSKE KQALILQSAE QWRKANIDVE 480 KTLNHLEELQ LQDPCFFYTV QKDEDGMLRS IFWTDARSRM DYEIFGDFVS FDTTFSTNRH 540 SMPFVPITGM NNRGRTIVLG CALLQDRKAE TYKWMLQTFL QEMGGGQTPR SVITSQDEAM 600 AKAIAEVMPQ ARHRFCRWNG KAQEKMAAFV AARGNMKAEL DILVDNSLTE TEFEQGWSAL 660 IQRHDASENE YLQLLWEMRK TWAPVYFMQD FFPFVVSARG SQGAFSLFKE NVLPKDKIEN 720 LIEKYEEMQD KIKKTDEEDA LEAATEPSCF SLQPIERHAS RVYTRQIFLK VQKELLHSTA 780 FKVQEIERGA LYRLDKASSY ENPEYDRDSF EVLIEPGVTD TYTCQCAKFA RDGILCCHVF 840 RLFTQFGIDE IPEKYIVARW TDGFREEQLE RREEGRLVAA ARREEDAARY AALMSKAAGI 900 GREICGDGAK CDAFMLELDR IREKMATMAM ANDHV

Sequence ? help Back to Top

Protein Sequence Length: 935 aa Download sequence

LPTSPPPSPS LQQRRPPPPP PPPPPPPYPP SPARSSSHLP SPPSPITRTG SRPKPLAPRS  60
SPHSNPDLDS HSTSAGARSR RPTPAMEEYL AAYTAKEDPA TPAQPAVQTA SAPPARAAGG  120
HAPQAPAAAA LPTSSRVVAK SNSSSAKTPG SSANKRVIYI VAGDDGSHVP ILRQVQVYGE  180
EAIKGYEKTP APACNVVKAR RDAGKQPVRR PRIQLLSNNR EERSADFMDD DEEAALALQV  240
KLERSASYAD RSLQLQTAEE HDVMEIDDIS SDDTGSESDS DISSGSESEK DEGKFFYPAP  300
EALGTVKAPQ VGMKFPTLED AHEYYNTYAL QTGFVVVRGR NYKRQRFQLD CNRNRKVKLV  360
EDLNLKRKRK KNVIEKTNCQ AKIIVKLIKG EWVIAAVQNE HNHPLSPSRS FTRFLTSQKH  420
MSPEERSFSR VLQQSRVPPG EILKILRRMS GFFRELPSKE KQALILQSAE QWRKANIDVE  480
KTLNHLEELQ LQDPCFFYTV QKDEDGMLRS IFWTDARSRM DYEIFGDFVS FDTTFSTNRH  540
SMPFVPITGM NNRGRTIVLG CALLQDRKAE TYKWMLQTFL QEMGGGQTPR SVITSQDEAM  600
AKAIAEVMPQ ARHRFCRWNG KAQEKMAAFV AARGNMKAEL DILVDNSLTE TEFEQGWSAL  660
IQRHDASENE YLQLLWEMRK TWAPVYFMQD FFPFVVSARG SQGAFSLFKE NVLPKDKIEN  720
LIEKYEEMQD KIKKTDEEDA LEAATEPSCF SLQPIERHAS RVYTRQIFLK VQKELLHSTA  780
FKVQEIERGA LYRLDKASSY ENPEYDRDSF EVLIEPGVTD TYTCQCAKFA RDGILCCHVF  840
RLFTQFGIDE IPEKYIVARW TDGFREEQLE RREEGRLVAA ARREEDAARY AALMSKAAGI  900
GREICGDGAK CDAFMLELDR IREKMATMAM ANDHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	365	372	LKRKRKKN
2	367	371	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-74	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG069070.2