PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG069070.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 703aa MW: 81257 Da PI: 6.4076

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG069070.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.8	9.8e-20	142	226	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6BG069070.4 142 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 226 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
AIKGYEKTPA PACNVVKARR DAGKQPVRRP RIQLLSNNRE ERSADFMDDD EEAALALQVK 60 LERSASYADR SLQLQTAEEH DVMEIDDISS DDTGSESDSD ISSGSESEKD EGKFFYPAPE 120 ALGTVKAPQV GMKFPTLEDA HEYYNTYALQ TGFVVVRGRN YKRQRFQLDC NRNRKVKLVE 180 DLNLKRKRKK NVIEKTNCQA KIIVKLIKGE WVIAAVQNEH NHPLSPSRSF TRFLTSQKHM 240 SPEERSFSRV LQQSRVPPGE ILKILRRMSG FFRELPSKEK QALILQSAEQ WRKANIDVEK 300 TLNHLEELQL QDPCFFYTVQ KDEDGMLRSI FWTDARSRMD YEIFGDFVSF DTTFSTNRHS 360 MPFVPITGMN NRGRTIVLGC ALLQDRKAET YKWMLQTFLQ EMGGGQTPRS VITSQDEAMA 420 KAIAEVMPQA RHRFCRWNGK AQEKMAAFVA ARGNMKAELD ILVDNSLTET EFEQGWSALI 480 QRHDASENEY LQLLWEMRKT WAPVYFMQDF FPFVVSARGS QGAFSLFKEN VLPKDKIENL 540 IEKYEEMQDK IKKTDEEDAL EAATEPSCFS LQPIERHASR VYTRQIFLKV QKELLHSTAF 600 KVQEIERGAL YRLDKASSYE NPEYDRDSFE VLIEPGVTDT YTCQCAKFAR DGILCCHVFR 660 LFTQFGIDEI PEKYIVARWT DGFREEQLER REEGRLVAAA RRE

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

AIKGYEKTPA PACNVVKARR DAGKQPVRRP RIQLLSNNRE ERSADFMDDD EEAALALQVK  60
LERSASYADR SLQLQTAEEH DVMEIDDISS DDTGSESDSD ISSGSESEKD EGKFFYPAPE  120
ALGTVKAPQV GMKFPTLEDA HEYYNTYALQ TGFVVVRGRN YKRQRFQLDC NRNRKVKLVE  180
DLNLKRKRKK NVIEKTNCQA KIIVKLIKGE WVIAAVQNEH NHPLSPSRSF TRFLTSQKHM  240
SPEERSFSRV LQQSRVPPGE ILKILRRMSG FFRELPSKEK QALILQSAEQ WRKANIDVEK  300
TLNHLEELQL QDPCFFYTVQ KDEDGMLRSI FWTDARSRMD YEIFGDFVSF DTTFSTNRHS  360
MPFVPITGMN NRGRTIVLGC ALLQDRKAET YKWMLQTFLQ EMGGGQTPRS VITSQDEAMA  420
KAIAEVMPQA RHRFCRWNGK AQEKMAAFVA ARGNMKAELD ILVDNSLTET EFEQGWSALI  480
QRHDASENEY LQLLWEMRKT WAPVYFMQDF FPFVVSARGS QGAFSLFKEN VLPKDKIENL  540
IEKYEEMQDK IKKTDEEDAL EAATEPSCFS LQPIERHASR VYTRQIFLKV QKELLHSTAF  600
KVQEIERGAL YRLDKASSYE NPEYDRDSFE VLIEPGVTDT YTCQCAKFAR DGILCCHVFR  660
LFTQFGIDEI PEKYIVARWT DGFREEQLER REEGRLVAAA RRE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	191	LKRKRKKN
2	186	190	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG069070.4