PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG069150.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 133aa    MW: 14794 Da    PI: 11.2508
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG069150.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260115.92.5e-367104197
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 
                       +C aCk+lrr+C+++Cv+apyf +eq +++fa++hk+FGasn  kll++lp  +r +a+ +++yeA+ r+rdPvyG+v+ i++lqqq+++++ 
  TRIDC6BG069150.4   7 PCGACKFLRRRCVAECVFAPYFSSEQgAARFAAIHKVFGASNAAKLLAHLPLADRCEAVVTITYEAQSRLRDPVYGCVAQIFALQQQVRRSRY 99 
                       7***********************9989*************************************************************9987 PP

            DUF260  93 elall 97 
                         ++l
  TRIDC6BG069150.4 100 SFHSL 104
                       76665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
AGVAGSPCGA CKFLRRRCVA ECVFAPYFSS EQGAARFAAI HKVFGASNAA KLLAHLPLAD  60
RCEAVVTITY EAQSRLRDPV YGCVAQIFAL QQQVRRSRYS FHSLRRRSLP RLRSTNQSSG  120
RHVCCRSRSC RRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.15e-53LBD family protein