PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG069510.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 562aa MW: 60893.1 Da PI: 5.5655

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG069510.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.3	2.8e-18	465	556	14	99
T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-..SS.SEE..EEEEE-S CS B3 14 grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkld..gr.sefelvvkvfrk 99 + lv+ k+fa+++ + k++++ l+led++ W vkli + +s++ +lt+GW++Fv +ngLk gD ++F+ d ++ ++ +++v ++rk TRIDC6BG069510.1 465 CALVFCKEFASACglPHAKKTTIHLQLEDKTTVPWPVKLICsEHNSNQRWLTTGWNKFVTDNGLKKGDACLFQPDksSNtEGLTMTVYLIRK 556 889********5533334566788999999***87788888899*********************6632445666777777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MDPGDGHDLD PSRLPGKNVS FFLDFSLLCV VVGSGGAAAA AAKRAVWCWM WGMHDNSDDA 60 GDGHKQFHLV ASADFSHDTR MPGEFGNHLT NITPESDLVK LVAHDEPISD SNRCEANGGS 120 ASDTDMQLEV TLSTLAIQFF CRFYENVHMR GLTWQDDEYM QWVSGYHHIE RTNGLSARFM 180 NELIGVGCYS YFPFGPFGPG STVITIPESA WAEISVGLQS MLITRLDSFL QPKHSNAMGL 240 NNSACTLPPE SVCVLADAAV SSSVLADVAV SDTSMFEAAV PEFATVSEGV LAAAVVSDGI 300 MVTAAVSDTA VSACALNSTA VPDVMTDIHE AAGANTVKKR SRSEVVVVTE HGRGPHSDKE 360 RCVPMELPSE NPKRKKSSVV MTTGQQCLQI SAVQQMGVEQ CGIEVCSNNL MGPSQRPYIL 420 PKKTTLPSEL EKKVKEKVKT IQSELPIFVR ELKTYSVVGT GQGGCALVFC KEFASACGLP 480 HAKKTTIHLQ LEDKTTVPWP VKLICSEHNS NQRWLTTGWN KFVTDNGLKK GDACLFQPDK 540 SSNTEGLTMT VYLIRKSSEK EL

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MDPGDGHDLD PSRLPGKNVS FFLDFSLLCV VVGSGGAAAA AAKRAVWCWM WGMHDNSDDA  60
GDGHKQFHLV ASADFSHDTR MPGEFGNHLT NITPESDLVK LVAHDEPISD SNRCEANGGS  120
ASDTDMQLEV TLSTLAIQFF CRFYENVHMR GLTWQDDEYM QWVSGYHHIE RTNGLSARFM  180
NELIGVGCYS YFPFGPFGPG STVITIPESA WAEISVGLQS MLITRLDSFL QPKHSNAMGL  240
NNSACTLPPE SVCVLADAAV SSSVLADVAV SDTSMFEAAV PEFATVSEGV LAAAVVSDGI  300
MVTAAVSDTA VSACALNSTA VPDVMTDIHE AAGANTVKKR SRSEVVVVTE HGRGPHSDKE  360
RCVPMELPSE NPKRKKSSVV MTTGQQCLQI SAVQQMGVEQ CGIEVCSNNL MGPSQRPYIL  420
PKKTTLPSEL EKKVKEKVKT IQSELPIFVR ELKTYSVVGT GQGGCALVFC KEFASACGLP  480
HAKKTTIHLQ LEDKTTVPWP VKLICSEHNS NQRWLTTGWN KFVTDNGLKK GDACLFQPDK  540
SSNTEGLTMT VYLIRKSSEK EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	3e-07	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG069510.1