PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG072750.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 205aa MW: 21221.6 Da PI: 9.8992

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG072750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	90	5.2e-28	32	82	2	52
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLl 52 a++k +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl TRIDC6BG072750.1 32 AVRKAPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLL 82 789***********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
XXXXXXXXXX AEGKQLVPVA AAASNGANGA LAVRKAPSKD RHSKVDGRGR RIRMPIICAA 60 RVFQLTRELG HKSDGQTIEW LLPLAVSPHH HLPHAAPFIL GKRVRDDDGG GGNGNGEAAA 120 VTAAMAPAPG FWALPARGDF GQLWSFAPPP EMMVAAPAMA GEASAARVGN YLPMAQANLN 180 LLASFSGGPG GAGQATGRAE EETAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-40	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG072750.1