PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG072750.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 250aa MW: 25739 Da PI: 10.2662

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG072750.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.7	8.5e-38	34	113	2	79
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesss 79 a++k +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tg+++++as++ +++s + TRIDC6BG072750.2 34 AVRKAPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFStsSPSSLR 113 789*************************************************************9999977722222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
XXXXXXXXXX XXAEGKQLVP VAAAASNGAN GALAVRKAPS KDRHSKVDGR GRRIRMPIIC 60 AARVFQLTRE LGHKSDGQTI EWLLRQAEPS IIAATGSGTT PASFSTSSPS SLRPPGAPHP 120 HPHAHAQPLA VSPHHHLPHA APFILGKRVR DDDGGGGNGN GEAAAVTAAM APAPGFWALP 180 ARGDFGQLWS FAPPPEMMVA APAMAGEASA ARVGNYLPMA QANLNLLASF SGGPGGAGQA 240 TGRAEEETAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-46	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG072750.2