PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG000030.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 173aa    MW: 18880.4 Da    PI: 10.8419
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG000030.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM144.17.5e-45171551128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkd 89 
                       lp+GfrF+Ptdeelv +yLk+k++g+ ++   +i++vd+  vePwdLp +  +k+++ ew+fF++rd+ +   +++r+ r+t++gyWkatgkd
  TRIDC7AG000030.2  17 LPVGFRFRPTDEELVRHYLKAKIAGRAHPDLLAIPDVDLAAVEPWDLPaRsVIKSDDPEWFFFARRDRPKYpgKSSRSCRSTAAGYWKATGKD 109
                       79*************************999899***************5347777888********9855435678999************** PP

               NAM  90 kevlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + +        kg+l+g+kktLvf++grap+g +t W+mhey++
  TRIDC7AG000030.2 110 RLIRAPgpggcrgKGALIGVKKTLVFHRGRAPRGARTPWIMHEYTA 155
                       ****9999999888889***************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
GSESSSSSTP ATAAAVLPVG FRFRPTDEEL VRHYLKAKIA GRAHPDLLAI PDVDLAAVEP  60
WDLPARSVIK SDDPEWFFFA RRDRPKYPGK SSRSCRSTAA GYWKATGKDR LIRAPGPGGC  120
RGKGALIGVK KTLVFHRGRA PRGARTPWIM HEYTATDPNP QSQSQSQSAV RQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.18e-56NAC family protein