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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC7AG000780.3 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | NAC | ||||||||
| Protein Properties | Length: 336aa MW: 39027.7 Da PI: 6.7425 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 176.7 | 6.3e-55 | 9 | 139 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
+ppGfrFhPtdeelv++yL+kkv++++++l +vik+vd+yk+ePwdL++ ++e+++wyfFs++dkky+tg+r+nrat++g+Wkatg+d
TRIDC7AG000780.3 9 VPPGFRFHPTDEELVDYYLRKKVASRRIDL-NVIKDVDLYKIEPWDLQEkcriGPEEEQSDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRD 100
69****************************.99**************95343322335669******************************** PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
k++++ k+ lvg++ktLv+ykgrap+g+k+dW+mheyrle
TRIDC7AG000780.3 101 KPIYA-KHCLVGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 139
*****.899*****************************85 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 336 aa Download sequence |
MSGSTQPQVP PGFRFHPTDE ELVDYYLRKK VASRRIDLNV IKDVDLYKIE PWDLQEKCRI 60 GPEEEQSDWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KPIYAKHCLV GMRKTLVYYK 120 GRAPNGQKSD WIMHEYRLET NENGPPQEEG WVVCRVFKKR LPTTRRDLDH DAPCWYVDDD 180 GPFMHDLNSP MRGMPPHHSM ALQEQHLQML NNTYKRELKL QYQMPNHHHV LNTIPHELES 240 PSSFHSLLVS PDDHQINVHH AQHHHVQLID HAVDDQAATD WRVLDKFVAS QLSNDAAKSV 300 DYAHEGDILQ LNEKAQELAT DYASTSTSSS QVDPWK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G12260.1 | 1e-102 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC7AG000780.3 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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