PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG001500.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 225aa    MW: 24729.7 Da    PI: 6.3066
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG001500.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.25.8e-114185147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT  E++++++a  ++  + W++I + +g  +t  q++s+ qky
  TRIDC7AG001500.1 41 RESWTDPEHDKFIEALLLFDRD-WRKIEAFVG-SKTVIQIRSHAQKY 85
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
IGSEAWVMAA VMEPAVGVGG EGEGAEGPGR VRKPYTITKS RESWTDPEHD KFIEALLLFD  60
RDWRKIEAFV GSKTVIQIRS HAQKYFLKVQ KNGTGEHLPP PRPKRKAAHP YPHNKASKKA  120
PEVDLPQQPP HVVEQGCVIP MDAPTVATNS SADDTFPSWD DVLAQPYSPR HTQDLGAANN  180
SSSSIECQSG TWATSDAIEQ EIWPTSDAID HARLCSSIQL SWGRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.28e-41MYB_related family protein