PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG002860.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 161aa MW: 17843.6 Da PI: 10.0032

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG002860.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.3	8.5e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+llvd++++ G g+W++ ++ g++R++k+c++rw +yl TRIDC7AG002860.1 15 KGPWTPEEDKLLVDYIQEKGHGSWRRLPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	55.5	1.3e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T +E++l+v+++ +lG++ W++Ia +++ gRt++++k++w+++l TRIDC7AG002860.1 68 RGLFTDDEEKLIVHLHSLLGNK-WSSIATKLP-GRTDNEIKNYWNTHL 113 788*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MGRSPCCDGE AGVKKGPWTP EEDKLLVDYI QEKGHGSWRR LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGL FTDDEEKLIV HLHSLLGNKW SSIATKLPGR TDNEIKNYWN THLRKKLLGM 120 GIDPVTHRPR TDLSLLAGLP GLLAAAGIFG GSGAATAAWD M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	7e-79	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG002860.1