PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG003620.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 108aa    MW: 12310.4 Da    PI: 10.6787
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG003620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF30.35.5e-104184346
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkl 46
                      i+++  r  +f kR+ g++K A  L  L++a+v vi+ +s+g +
  TRIDC7AG003620.1 41 INDDNERDGSFFKRLSGLFKSAANLNALTGARVDVILEASNGVM 84
                      899999*******************************9999965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
GFGKSLAFYR FLLFLFIAIS FIFLIGFSMP RRERRSGVAY INDDNERDGS FFKRLSGLFK  60
SAANLNALTG ARVDVILEAS NGVMLFQTNH PTMDFLGWML TWAVMVQR