PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG006050.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 233aa    MW: 24666.6 Da    PI: 7.8974
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG006050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1759110155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++   grWv+e+r p  n+ + r++lg+f ++e Aa+a++ a+++l+g
  TRIDC7AG006050.1  59 PVYRGVRRRGAAGRWVCEVRQP--NN-KSRIWLGTFASPEAAARAHDVAALALRG 110
                       68****************7776..44.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
SQANTIDSLA TVSADKQTID PCKMDNSGVI FYGGAYATVM SAPPKRPAGR TKFRETRHPV  60
YRGVRRRGAA GRWVCEVRQP NNKSRIWLGT FASPEAAARA HDVAALALRG RAACLNFADS  120
AALLAVDPAT LRTPQDIRAA AITLARAACP HDATRSSVSA ASAPAPAMVI TQEAAAAPYD  180
SYAMYGGLAD LEQHSHCYYD GMSGSGDWQS ISHMNVADED GGYGAGDVAL WSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.11e-23ERF family protein