PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG006730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 260aa    MW: 29621.6 Da    PI: 10.2248
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG006730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.12.1e-15165255199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k +t+s+v+   +l lpk+f+++h  k  ++  +tl de+g + + ++  rk +    l++ Wk F+  ++L +gD +vF++++r +f  +
  TRIDC7AG006730.1 165 FVKPMTQSHVTGGFWLGLPKQFCTRHLPK--RDEWITLVDEKGAESDSYYLARKWG----LSAQWKAFAINHKLVDGDCLVFERIDRAKF--K 249
                       89************************433..4558***************444444....9999*******************8877777..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v+++r+
  TRIDC7AG006730.1 250 VHIIRQ 255
                       999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
PFWPPPPHSH LPQPSAAAAR ERNPEIAGEG MAGAVAYEEQ RRRQVEENRR KLDQLKLHHL  60
SAALRDAAVD PKPSPVKSAK RKPRGPPPGD APPRRSGRVA SLPEQPNYRF EDTYGVLEKS  120
IRGSRTHTTR SDLIDRVYAT EEARTYATDM AEQLQGKLDP RHPSFVKPMT QSHVTGGFWL  180
GLPKQFCTRH LPKRDEWITL VDEKGAESDS YYLARKWGLS AQWKAFAINH KLVDGDCLVF  240
ERIDRAKFKV HIIRQSSYYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-50B3 family protein