PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG009430.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 249aa MW: 26664.2 Da PI: 9.3604

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG009430.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.8	1.1e-19	89	143	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee+F+ +++++ +++ LA++lgL rqV vWFqNrRa+ k TRIDC7AG009430.3 89 RKKLRLSKDQAAVLEECFKTHHTLTPKQKLALANSLGLRPRQVEVWFQNRRARTK 143 788899***********************************************98 PP
2	HD-ZIP_I/II	123.7	8.7e-40	89	179	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlsk+q+++LEe+F+++++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +lk TRIDC7AG009430.3 89 RKKLRLSKDQAAVLEECFKTHHTLTPKQKLALANSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYMKRWCEQLAEQNRRLEKEVAELR-ALK 179 69*************************************************************************************9.565 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MAPQSLDLGL SLGLGLVSQP TLPSFWYSGG NVAADQEVGP TPTAAAVEER RCSPGSPASS 60 GSGSGLKRGA ERSAGSGDED QDDDGGNARK KLRLSKDQAA VLEECFKTHH TLTPKQKLAL 120 ANSLGLRPRQ VEVWFQNRRA RTKLKQTEVD CEYMKRWCEQ LAEQNRRLEK EVAELRALKA 180 APPAHNGASA GPLTTLTMCL SCKRVASTGM PVPSPVAMPE HRQFFCGFRD TGATYGSSAG 240 LAKVVKAAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	146	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	8e-54	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG009430.3