PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG009440.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 66aa MW: 7416.43 Da PI: 11.6123

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG009440.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.5	1.2e-18	9	62	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k +++k+q +Lee+F+ ++ ++ ++ + LA++lgL +qV vWF+NrRa+ k TRIDC7AG009440.1 9 KNLRMSKDQSAVLEECFKTHSALNPKQNTALANRLGLRPQQVEVWFHNRRARTK 62 556799**********************************************98 PP
2	HD-ZIP_I/II	82	8.8e-27	8	66	1	59
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkql 59 +k +r+sk+q+++LEe+F++++ L+p++ ++la++Lgl+p+qv+vWF nrRARtk+kq+ TRIDC7AG009440.1 8 RKNLRMSKDQSAVLEECFKTHSALNPKQNTALANRLGLRPQQVEVWFHNRRARTKLKQT 66 5899*****************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 66 aa Download sequence
GGDGAGGRKN LRMSKDQSAV LEECFKTHSA LNPKQNTALA NRLGLRPQQV EVWFHNRRAR 60 TKLKQT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	65	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	2e-28	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG009440.1