PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG009990.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 377aa    MW: 43567.9 Da    PI: 6.5074
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG009990.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.77.5e-12541341399
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++ +++p + +++++ +     +++le+++g    + +   k  ++ ++t GW++Fv   +L+ gD ++F+++g+s+f  +v +f+k
  TRIDC7AG009990.3  54 RDEMIIPEELVQRFKRD--ILGEIKLETRNGDNHAIVV--AKIEEKRIFTVGWRQFVANYDLQIGDLLMFRYKGNSQF--NVIIFDK 134
                       56799******999766..4458***************..888888899*************************9*99..8888875 PP
2B335.41.9e-112042881599
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        +v+p   +++++g+   +++++le+++ rs+++ ++       + ++ v++ GW +Fv+  gL++gD++v+ ++g+s+f   v +f+k
  TRIDC7AG009990.3 204 EMVIPEGILQRFKGE--FPREIKLETQNRRSYKIGVTEnkldICYNQKLVFSVGWGKFVETFGLQAGDTIVLIYNGNSQF--SVIIFDK 288
                       589999999999877..7789***************6544532234459***************************9999..8888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
LATIYHCKHI LHCRACSNGM CTSCECCKRR DEYYYRNLDD EKKYFLVLLI GDFRDEMIIP  60
EELVQRFKRD ILGEIKLETR NGDNHAIVVA KIEEKRIFTV GWRQFVANYD LQIGDLLMFR  120
YKGNSQFNVI IFDKLGREKA SSVVLDPFIP RVQDRGNEAH EIGSSEKMDV QCGRCNNWLE  180
YHYADLDNEN KYFLMLMMGD FQYEMVIPEG ILQRFKGEFP REIKLETQNR RSYKIGVTEN  240
KLDICYNQKL VFSVGWGKFV ETFGLQAGDT IVLIYNGNSQ FSVIIFDKHG CEKAISVIVD  300
PVPPPVQERR PYGTDIVKSS HFYPQPMQRQ SFIVVNGLPV ESLPIEGQWR AQLEMDKSCQ  360
GSRAAINTPP SESSGLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-13B3 family protein